Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL591163.1-201ENST00000641757 987 ntBASIC14.59□□□□□ -0.07
CSMD2Q7Z408 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD2Q7Z408 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CSMD2Q7Z408 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSMD2Q7Z408 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC104581.1-202ENST00000635932 2618 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 MIR658-201ENST00000385210 100 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 COX5BP2-201ENST00000392354 334 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 HCG4-201ENST00000418983 998 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC106886.1-201ENST00000568660 600 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC009336.1-201ENST00000608941 1553 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AP000997.3-201ENST00000623333 2250 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 AL138828.2-201ENST00000615812 383 ntBASIC14.57□□□□□ -0.08
CSMD2Q7Z408 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CSMD2Q7Z408 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 GPR182-203ENST00000622922 591 ntBASIC14.56□□□□□ -0.08
CSMD2Q7Z408 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD2Q7Z408 LINC00982-205ENST00000420957 435 ntBASIC14.56□□□□□ -0.08
CSMD2Q7Z408 TMEM14DP-201ENST00000422205 345 ntBASIC14.56□□□□□ -0.08
CSMD2Q7Z408 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms