Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDKL1Q00532 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 AC125634.1-201ENST00000438758 1403 ntBASIC17.23■□□□□ 0.35
CDKL1Q00532 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL1Q00532 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL1Q00532 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL1Q00532 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 AL845331.1-201ENST00000424978 1190 ntBASIC17.23■□□□□ 0.35
CDKL1Q00532 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 BX276092.5-203ENST00000456199 560 ntBASIC17.23■□□□□ 0.35
CDKL1Q00532 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL1Q00532 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CDKL1Q00532 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDKL1Q00532 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL1Q00532 AC010460.3-201ENST00000511359 1579 ntBASIC17.23■□□□□ 0.35
CDKL1Q00532 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL1Q00532 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.22■□□□□ 0.35
CDKL1Q00532 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 CHCHD2P8-201ENST00000429873 447 ntBASIC17.22■□□□□ 0.35
CDKL1Q00532 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
CDKL1Q00532 AC011840.4-201ENST00000578471 627 ntBASIC17.22■□□□□ 0.35
CDKL1Q00532 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.22■□□□□ 0.35
CDKL1Q00532 AL138831.2-201ENST00000606564 490 ntBASIC17.22■□□□□ 0.35
CDKL1Q00532 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL1Q00532 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL1Q00532 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL1Q00532 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL1Q00532 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
CDKL1Q00532 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL1Q00532 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL1Q00532 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL1Q00532 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
CDKL1Q00532 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL1Q00532 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms