Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 GMCL1P1-201ENST00000463439 1581 ntBASIC18.23■□□□□ 0.51
IRX4P78413 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 MIR564-202ENST00000385049 94 ntBASIC18.23■□□□□ 0.51
IRX4P78413 MIR1233-2-201ENST00000408138 82 ntBASIC18.23■□□□□ 0.51
IRX4P78413 MIR1233-1-201ENST00000408722 82 ntBASIC18.23■□□□□ 0.51
IRX4P78413 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.23■□□□□ 0.51
IRX4P78413 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.23■□□□□ 0.51
IRX4P78413 AC024563.2-201ENST00000603282 481 ntBASIC18.23■□□□□ 0.51
IRX4P78413 AC148477.8-201ENST00000624298 468 ntBASIC18.23■□□□□ 0.51
IRX4P78413 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 FLJ13224-201ENST00000313737 1514 ntBASIC18.23■□□□□ 0.51
IRX4P78413 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IRX4P78413 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IRX4P78413 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.23■□□□□ 0.51
IRX4P78413 PHGDH-209ENST00000641074 1780 ntBASIC18.22■□□□□ 0.51
IRX4P78413 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX4P78413 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.22■□□□□ 0.51
IRX4P78413 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IRX4P78413 AC092183.1-201ENST00000469884 875 ntBASIC18.22■□□□□ 0.51
IRX4P78413 POLD2P1-201ENST00000511220 997 ntBASIC18.22■□□□□ 0.51
IRX4P78413 KRT18P41-201ENST00000518924 1277 ntBASIC18.22■□□□□ 0.51
IRX4P78413 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.22■□□□□ 0.51
IRX4P78413 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX4P78413 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX4P78413 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
IRX4P78413 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.22■□□□□ 0.51
IRX4P78413 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
IRX4P78413 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.22■□□□□ 0.51
IRX4P78413 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IRX4P78413 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
IRX4P78413 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IRX4P78413 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 FER1L4-210ENST00000615531 5998 ntBASIC18.21■□□□□ 0.51
IRX4P78413 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IRX4P78413 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
IRX4P78413 KRT18P67-201ENST00000432816 1264 ntBASIC18.21■□□□□ 0.51
IRX4P78413 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX4P78413 AC009065.1-201ENST00000564055 1225 ntBASIC18.21■□□□□ 0.51
IRX4P78413 AC106730.1-201ENST00000566722 1090 ntBASIC18.21■□□□□ 0.51
IRX4P78413 AC011840.4-201ENST00000578471 627 ntBASIC18.21■□□□□ 0.51
IRX4P78413 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX4P78413 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.21■□□□□ 0.51
IRX4P78413 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.21■□□□□ 0.51
IRX4P78413 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IRX4P78413 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IRX4P78413 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IRX4P78413 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.21■□□□□ 0.51
IRX4P78413 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
IRX4P78413 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
IRX4P78413 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms