Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
NCAPD3P42695 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NCAPD3P42695 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NCAPD3P42695 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC30.5■■■□□ 2.47
NCAPD3P42695 AC138969.3-201ENST00000546612 1459 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 AC138932.2-201ENST00000548268 1459 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 AC126755.4-201ENST00000549796 1459 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NCAPD3P42695 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NCAPD3P42695 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC30.49■■■□□ 2.47
NCAPD3P42695 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC30.49■■■□□ 2.47
NCAPD3P42695 PTPA-220ENST00000436883 532 ntTSL 4 BASIC30.49■■■□□ 2.47
NCAPD3P42695 AC245100.3-201ENST00000441281 285 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC30.49■■■□□ 2.47
NCAPD3P42695 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
NCAPD3P42695 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC30.49■■■□□ 2.47
NCAPD3P42695 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC30.49■■■□□ 2.47
NCAPD3P42695 AL844908.2-201ENST00000609461 460 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 AC008738.7-201ENST00000609744 511 ntBASIC30.49■■■□□ 2.47
NCAPD3P42695 GPER1-207ENST00000619052 571 ntTSL 2 BASIC30.49■■■□□ 2.47
NCAPD3P42695 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NCAPD3P42695 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC30.49■■■□□ 2.47
NCAPD3P42695 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC30.49■■■□□ 2.47
NCAPD3P42695 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NCAPD3P42695 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC30.49■■■□□ 2.47
NCAPD3P42695 HNRNPRP1-201ENST00000453465 1695 ntBASIC30.48■■■□□ 2.47
NCAPD3P42695 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC30.48■■■□□ 2.47
NCAPD3P42695 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
NCAPD3P42695 AC009407.1-201ENST00000568958 598 ntBASIC30.48■■■□□ 2.47
NCAPD3P42695 AL162274.1-201ENST00000617191 1098 ntBASIC30.48■■■□□ 2.47
NCAPD3P42695 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NCAPD3P42695 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCAPD3P42695 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
NCAPD3P42695 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCAPD3P42695 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC30.47■■■□□ 2.47
NCAPD3P42695 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCAPD3P42695 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
NCAPD3P42695 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC30.47■■■□□ 2.47
NCAPD3P42695 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NCAPD3P42695 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
NCAPD3P42695 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NCAPD3P42695 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 RNU1-129P-201ENST00000384064 167 ntBASIC30.46■■■□□ 2.47
NCAPD3P42695 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC30.46■■■□□ 2.47
NCAPD3P42695 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC30.46■■■□□ 2.47
NCAPD3P42695 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC30.46■■■□□ 2.47
NCAPD3P42695 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC30.46■■■□□ 2.47
NCAPD3P42695 MPI-209ENST00000564003 1195 ntTSL 2 BASIC30.46■■■□□ 2.47
NCAPD3P42695 AC106886.1-201ENST00000568660 600 ntBASIC30.46■■■□□ 2.47
NCAPD3P42695 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC30.46■■■□□ 2.47
NCAPD3P42695 U1.21-201ENST00000580816 167 ntBASIC30.46■■■□□ 2.47
NCAPD3P42695 NKG7-205ENST00000600427 520 ntTSL 3 BASIC30.46■■■□□ 2.47
NCAPD3P42695 AC017083.2-201ENST00000608069 979 ntBASIC30.46■■■□□ 2.47
NCAPD3P42695 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC30.46■■■□□ 2.47
NCAPD3P42695 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NCAPD3P42695 AC012569.1-201ENST00000591191 1524 ntBASIC30.45■■■□□ 2.47
NCAPD3P42695 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NCAPD3P42695 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
NCAPD3P42695 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC30.45■■■□□ 2.47
NCAPD3P42695 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NCAPD3P42695 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NCAPD3P42695 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NCAPD3P42695 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC30.44■■■□□ 2.46
NCAPD3P42695 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 AC098614.1-201ENST00000368528 745 ntBASIC30.44■■■□□ 2.46
NCAPD3P42695 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC30.44■■■□□ 2.46
NCAPD3P42695 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
NCAPD3P42695 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC30.44■■■□□ 2.46
NCAPD3P42695 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC30.44■■■□□ 2.46
NCAPD3P42695 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC30.44■■■□□ 2.46
NCAPD3P42695 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC30.44■■■□□ 2.46
NCAPD3P42695 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NCAPD3P42695 GRAMD4P3-201ENST00000621665 1669 ntBASIC30.44■■■□□ 2.46
NCAPD3P42695 AFG3L1P-217ENST00000557444 2447 ntBASIC30.44■■■□□ 2.46
NCAPD3P42695 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 HNRNPA3P1-201ENST00000401429 1139 ntBASIC30.44■■■□□ 2.46
NCAPD3P42695 HNRNPA3P5-201ENST00000455201 833 ntBASIC30.44■■■□□ 2.46
NCAPD3P42695 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
NCAPD3P42695 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms