Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGCLP35914 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGCLP35914 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGCLP35914 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGCLP35914 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGCLP35914 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCLP35914 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HMGCLP35914 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 AL135999.2-201ENST00000622438 1686 ntBASIC17.39■□□□□ 0.37
HMGCLP35914 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGCLP35914 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLP35914 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLP35914 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGCLP35914 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGCLP35914 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
HMGCLP35914 SCARNA2-201ENST00000458748 420 ntBASIC17.39■□□□□ 0.37
HMGCLP35914 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.39■□□□□ 0.37
HMGCLP35914 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.39■□□□□ 0.37
HMGCLP35914 RN7SL510P-201ENST00000581311 263 ntBASIC17.39■□□□□ 0.37
HMGCLP35914 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGCLP35914 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.37
HMGCLP35914 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGCLP35914 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCLP35914 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGCLP35914 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCLP35914 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 EMBP1-201ENST00000458200 901 ntBASIC17.38■□□□□ 0.37
HMGCLP35914 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.38■□□□□ 0.37
HMGCLP35914 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 NKAPP1-205ENST00000585790 367 ntBASIC17.38■□□□□ 0.37
HMGCLP35914 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCLP35914 AL691432.3-201ENST00000621860 400 ntBASIC17.38■□□□□ 0.37
HMGCLP35914 AL023806.1-201ENST00000603994 1649 ntBASIC17.38■□□□□ 0.37
HMGCLP35914 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGCLP35914 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGCLP35914 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGCLP35914 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms