Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 AL023806.1-201ENST00000603994 1649 ntBASIC17.48■□□□□ 0.39
XRCC1P18887 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.48■□□□□ 0.39
XRCC1P18887 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.48■□□□□ 0.39
XRCC1P18887 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.48■□□□□ 0.39
XRCC1P18887 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.48■□□□□ 0.39
XRCC1P18887 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 AC009533.2-201ENST00000543664 586 ntBASIC17.48■□□□□ 0.39
XRCC1P18887 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.48■□□□□ 0.39
XRCC1P18887 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.48■□□□□ 0.39
XRCC1P18887 AL138831.2-201ENST00000606564 490 ntBASIC17.48■□□□□ 0.39
XRCC1P18887 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.48■□□□□ 0.39
XRCC1P18887 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
XRCC1P18887 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
XRCC1P18887 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
XRCC1P18887 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.47■□□□□ 0.39
XRCC1P18887 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.47■□□□□ 0.39
XRCC1P18887 DUTP2-201ENST00000519164 463 ntBASIC17.47■□□□□ 0.39
XRCC1P18887 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.47■□□□□ 0.39
XRCC1P18887 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.47■□□□□ 0.39
XRCC1P18887 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
XRCC1P18887 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
XRCC1P18887 AC125634.1-201ENST00000438758 1403 ntBASIC17.47■□□□□ 0.39
XRCC1P18887 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
XRCC1P18887 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
XRCC1P18887 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
XRCC1P18887 NUS1P2-201ENST00000417358 873 ntBASIC17.46■□□□□ 0.39
XRCC1P18887 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
XRCC1P18887 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
XRCC1P18887 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.46■□□□□ 0.39
XRCC1P18887 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.46■□□□□ 0.39
XRCC1P18887 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.46■□□□□ 0.39
XRCC1P18887 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.46■□□□□ 0.39
XRCC1P18887 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.46■□□□□ 0.39
XRCC1P18887 MIR5100-201ENST00000579544 119 ntBASIC17.46■□□□□ 0.39
XRCC1P18887 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms