Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.45■□□□□ 0.54
RTN3O95197 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 SLC25A6P5-201ENST00000435663 894 ntBASIC18.45■□□□□ 0.54
RTN3O95197 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.45■□□□□ 0.54
RTN3O95197 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 BX005266.1-201ENST00000473402 457 ntBASIC18.45■□□□□ 0.54
RTN3O95197 OR7E14P-202ENST00000530490 1290 ntBASIC18.45■□□□□ 0.54
RTN3O95197 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.45■□□□□ 0.54
RTN3O95197 AC025062.2-201ENST00000605477 670 ntBASIC18.45■□□□□ 0.54
RTN3O95197 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 FAM215A-202ENST00000632077 792 ntBASIC18.45■□□□□ 0.54
RTN3O95197 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN3O95197 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN3O95197 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN3O95197 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 AC132938.5-201ENST00000624980 1813 ntBASIC18.44■□□□□ 0.54
RTN3O95197 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RTN3O95197 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.44■□□□□ 0.54
RTN3O95197 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 RPS2P1-201ENST00000434010 821 ntBASIC18.44■□□□□ 0.54
RTN3O95197 HNRNPDP1-201ENST00000439535 754 ntBASIC18.44■□□□□ 0.54
RTN3O95197 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 BX640515.1-201ENST00000617215 977 ntBASIC18.44■□□□□ 0.54
RTN3O95197 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.44■□□□□ 0.54
RTN3O95197 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTN3O95197 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTN3O95197 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 AL513477.1-201ENST00000602865 2407 ntBASIC18.43■□□□□ 0.54
RTN3O95197 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RTN3O95197 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 AC005104.2-201ENST00000427818 678 ntBASIC18.43■□□□□ 0.54
RTN3O95197 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RTN3O95197 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.43■□□□□ 0.54
RTN3O95197 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN3O95197 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.43■□□□□ 0.54
RTN3O95197 STK25P1-201ENST00000585406 838 ntBASIC18.43■□□□□ 0.54
RTN3O95197 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.43■□□□□ 0.54
RTN3O95197 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
RTN3O95197 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RTN3O95197 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
RTN3O95197 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.43■□□□□ 0.54
RTN3O95197 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTN3O95197 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms