Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 AC106820.2-201ENST00000563775 3264 ntBASIC17.63■□□□□ 0.41
TRIM38O00635 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM38O00635 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 AC093909.1-201ENST00000504731 1122 ntBASIC17.63■□□□□ 0.41
TRIM38O00635 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM38O00635 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM38O00635 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.63■□□□□ 0.41
TRIM38O00635 MTDHP3-201ENST00000594186 672 ntBASIC17.63■□□□□ 0.41
TRIM38O00635 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM38O00635 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM38O00635 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM38O00635 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM38O00635 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 AC124067.4-201ENST00000519691 2379 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM38O00635 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 HNRNPDP1-201ENST00000439535 754 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 MTCL1P1-201ENST00000446207 792 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM38O00635 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM38O00635 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 AP001269.4-201ENST00000609611 512 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 MIR7706-201ENST00000613747 67 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 AC139530.3-201ENST00000620344 690 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 AC009154.2-201ENST00000621177 724 ntBASIC17.62■□□□□ 0.41
TRIM38O00635 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM38O00635 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM38O00635 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM38O00635 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM38O00635 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM38O00635 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM38O00635 LINC00602-201ENST00000629776 2065 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms