Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Rtn4rQ99PI8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rQ99PI8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rtn4rQ99PI8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rQ99PI8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rtn4rQ99PI8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.49■□□□□ 0.71
Rtn4rQ99PI8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rQ99PI8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.48■□□□□ 0.71
Rtn4rQ99PI8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rtn4rQ99PI8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rtn4rQ99PI8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rtn4rQ99PI8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rtn4rQ99PI8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rtn4rQ99PI8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtn4rQ99PI8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtn4rQ99PI8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.44■□□□□ 0.7
Rtn4rQ99PI8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rtn4rQ99PI8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rtn4rQ99PI8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.43■□□□□ 0.7
Rtn4rQ99PI8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtn4rQ99PI8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtn4rQ99PI8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtn4rQ99PI8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rtn4rQ99PI8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtn4rQ99PI8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4rQ99PI8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtn4rQ99PI8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn4rQ99PI8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rtn4rQ99PI8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Rtn4rQ99PI8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4rQ99PI8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtn4rQ99PI8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rQ99PI8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rQ99PI8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn4rQ99PI8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn4rQ99PI8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.37■□□□□ 0.69
Rtn4rQ99PI8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rtn4rQ99PI8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Gm10420-201ENSMUST00000121713 882 ntBASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn4rQ99PI8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn4rQ99PI8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn4rQ99PI8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms