Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga11Q91XY8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga11Q91XY8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga11Q91XY8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga11Q91XY8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga11Q91XY8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.14■□□□□ 0.98
Pcdhga11Q91XY8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga11Q91XY8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga11Q91XY8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhga11Q91XY8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga11Q91XY8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.12■□□□□ 0.97
Pcdhga11Q91XY8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdhga11Q91XY8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga11Q91XY8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhga11Q91XY8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga11Q91XY8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga11Q91XY8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga11Q91XY8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga11Q91XY8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhga11Q91XY8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga11Q91XY8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga11Q91XY8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga11Q91XY8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhga11Q91XY8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.08■□□□□ 0.97
Pcdhga11Q91XY8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga11Q91XY8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhga11Q91XY8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga11Q91XY8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga11Q91XY8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms