Protein–RNA interactions for Protein: Q8VCM7

Fgg, Fibrinogen gamma chain, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FggQ8VCM7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FggQ8VCM7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FggQ8VCM7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FggQ8VCM7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.15■□□□□ 0.98
FggQ8VCM7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
FggQ8VCM7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
FggQ8VCM7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FggQ8VCM7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FggQ8VCM7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FggQ8VCM7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
FggQ8VCM7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FggQ8VCM7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.13■□□□□ 0.97
FggQ8VCM7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
FggQ8VCM7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FggQ8VCM7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FggQ8VCM7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FggQ8VCM7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FggQ8VCM7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FggQ8VCM7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FggQ8VCM7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FggQ8VCM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.11■□□□□ 0.97
FggQ8VCM7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.11■□□□□ 0.97
FggQ8VCM7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FggQ8VCM7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.1■□□□□ 0.97
FggQ8VCM7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.1■□□□□ 0.97
FggQ8VCM7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FggQ8VCM7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FggQ8VCM7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FggQ8VCM7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FggQ8VCM7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.08■□□□□ 0.97
FggQ8VCM7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FggQ8VCM7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FggQ8VCM7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FggQ8VCM7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FggQ8VCM7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FggQ8VCM7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
FggQ8VCM7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
FggQ8VCM7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
FggQ8VCM7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FggQ8VCM7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
FggQ8VCM7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FggQ8VCM7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
FggQ8VCM7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
FggQ8VCM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FggQ8VCM7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FggQ8VCM7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FggQ8VCM7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FggQ8VCM7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FggQ8VCM7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
FggQ8VCM7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FggQ8VCM7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FggQ8VCM7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FggQ8VCM7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FggQ8VCM7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FggQ8VCM7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FggQ8VCM7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FggQ8VCM7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.02■□□□□ 0.96
FggQ8VCM7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FggQ8VCM7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
FggQ8VCM7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FggQ8VCM7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
FggQ8VCM7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
FggQ8VCM7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.01■□□□□ 0.95
FggQ8VCM7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.01■□□□□ 0.95
FggQ8VCM7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FggQ8VCM7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
FggQ8VCM7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FggQ8VCM7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
FggQ8VCM7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FggQ8VCM7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21■□□□□ 0.95
FggQ8VCM7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FggQ8VCM7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FggQ8VCM7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FggQ8VCM7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms