Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shisa3Q3UPR0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Shisa3Q3UPR0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shisa3Q3UPR0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Shisa3Q3UPR0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Shisa3Q3UPR0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.08■□□□□ 0.64
Shisa3Q3UPR0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shisa3Q3UPR0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Shisa3Q3UPR0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shisa3Q3UPR0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shisa3Q3UPR0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shisa3Q3UPR0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Shisa3Q3UPR0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shisa3Q3UPR0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shisa3Q3UPR0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa3Q3UPR0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa3Q3UPR0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa3Q3UPR0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shisa3Q3UPR0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa3Q3UPR0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa3Q3UPR0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shisa3Q3UPR0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Shisa3Q3UPR0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.02■□□□□ 0.64
Shisa3Q3UPR0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shisa3Q3UPR0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Shisa3Q3UPR0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.02■□□□□ 0.63
Shisa3Q3UPR0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa3Q3UPR0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa3Q3UPR0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa3Q3UPR0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa3Q3UPR0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shisa3Q3UPR0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa3Q3UPR0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19■□□□□ 0.63
Shisa3Q3UPR0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa3Q3UPR0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Shisa3Q3UPR0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shisa3Q3UPR0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa3Q3UPR0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa3Q3UPR0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shisa3Q3UPR0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa3Q3UPR0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa3Q3UPR0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shisa3Q3UPR0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Shisa3Q3UPR0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa3Q3UPR0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa3Q3UPR0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shisa3Q3UPR0 Gm7432-201ENSMUST00000210343 879 ntBASIC18.96■□□□□ 0.63
Shisa3Q3UPR0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shisa3Q3UPR0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa3Q3UPR0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa3Q3UPR0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa3Q3UPR0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa3Q3UPR0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shisa3Q3UPR0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms