Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 tG(GCC)G2tG(GCC)G2 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)J1tG(GCC)J1 71 nt5.71□□□□□ -1.5
RFU1Q08003 SUF23tG(GCC)J2 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)MtG(GCC)M 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)O1tG(GCC)O1 71 nt5.71□□□□□ -1.5
RFU1Q08003 SUF17tG(GCC)O2 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)P1tG(GCC)P1 71 nt5.71□□□□□ -1.5
RFU1Q08003 tG(GCC)P2tG(GCC)P2 71 nt5.71□□□□□ -1.5
RFU1Q08003 YUR1YJL139C 1287 nt5.71□□□□□ -1.5
RFU1Q08003 SAC6YDR129C 1929 nt5.71□□□□□ -1.5
RFU1Q08003 YKR023WYKR023W 1593 nt5.71□□□□□ -1.5
RFU1Q08003 FMP40YPL222W 2067 nt5.7□□□□□ -1.5
RFU1Q08003 HIS1YER055C 894 nt5.7□□□□□ -1.5
RFU1Q08003 CUE4YML101C 354 nt5.7□□□□□ -1.5
RFU1Q08003 RNH1YMR234W 1047 nt5.7□□□□□ -1.5
RFU1Q08003 PUS4YNL292W 1212 nt5.7□□□□□ -1.5
RFU1Q08003 OPI11YPR044C 354 nt5.7□□□□□ -1.5
RFU1Q08003 COQ1YBR003W 1422 nt5.7□□□□□ -1.5
RFU1Q08003 RGD1YBR260C 2001 nt5.7□□□□□ -1.5
RFU1Q08003 PRY3YJL078C 2646 nt5.7□□□□□ -1.5
RFU1Q08003 LSG1YGL099W 1923 nt5.7□□□□□ -1.5
RFU1Q08003 YHK8YHR048W 1545 nt5.69□□□□□ -1.5
RFU1Q08003 PEX31YGR004W 1389 nt5.69□□□□□ -1.5
RFU1Q08003 COX10YPL172C 1389 nt5.69□□□□□ -1.5
RFU1Q08003 YKR032WYKR032W 315 nt5.69□□□□□ -1.5
RFU1Q08003 GEF1YJR040W 2340 nt5.68□□□□□ -1.5
RFU1Q08003 NTE1YML059C 5040 nt5.68□□□□□ -1.5
RFU1Q08003 YDR415CYDR415C 1125 nt5.68□□□□□ -1.5
RFU1Q08003 HSP12YFL014W 330 nt5.68□□□□□ -1.5
RFU1Q08003 ASF1YJL115W 840 nt5.68□□□□□ -1.5
RFU1Q08003 YNL092WYNL092W 1203 nt5.68□□□□□ -1.5
RFU1Q08003 CWC27YPL064C 906 nt5.68□□□□□ -1.5
RFU1Q08003 RPL5YPL131W 894 nt5.68□□□□□ -1.5
RFU1Q08003 IRS4YKR019C 1848 nt5.68□□□□□ -1.5
RFU1Q08003 TEL2YGR099W 2067 nt5.68□□□□□ -1.5
RFU1Q08003 RMD9YGL107C 1941 nt5.68□□□□□ -1.5
RFU1Q08003 EDE1YBL047C 4146 nt5.67□□□□□ -1.5
RFU1Q08003 MRPL35YDR322W 1104 nt5.67□□□□□ -1.5
RFU1Q08003 YBR124WYBR124W 360 nt5.67□□□□□ -1.5
RFU1Q08003 DOT1YDR440W 1749 nt5.67□□□□□ -1.5
RFU1Q08003 CRH1YGR189C 1524 nt5.67□□□□□ -1.5
RFU1Q08003 IMA2YOL157C 1770 nt5.67□□□□□ -1.5
RFU1Q08003 GPH1YPR160W 2709 nt5.67□□□□□ -1.5
RFU1Q08003 FMO1YHR176W 1299 nt5.66□□□□□ -1.5
RFU1Q08003 YRB2YIL063C 984 nt5.66□□□□□ -1.5
RFU1Q08003 YJR107WYJR107W 987 nt5.66□□□□□ -1.5
RFU1Q08003 OPI8YKR035C 642 nt5.66□□□□□ -1.5
RFU1Q08003 SUR7YML052W 909 nt5.66□□□□□ -1.5
RFU1Q08003 KSH1YNL024C-A 219 nt5.66□□□□□ -1.5
RFU1Q08003 RFC4YOL094C 972 nt5.66□□□□□ -1.5
RFU1Q08003 YBR113WYBR113W 483 nt5.66□□□□□ -1.5
RFU1Q08003 ADH5YBR145W 1056 nt5.66□□□□□ -1.5
RFU1Q08003 SLA2YNL243W 2907 nt5.66□□□□□ -1.5
RFU1Q08003 STT3YGL022W 2157 nt5.66□□□□□ -1.5
RFU1Q08003 LCL3YGL085W 825 nt5.65□□□□□ -1.5
RFU1Q08003 DYS1YHR068W 1164 nt5.65□□□□□ -1.5
RFU1Q08003 YHR213W-BYHR213W-B 300 nt5.65□□□□□ -1.5
RFU1Q08003 YKL077WYKL077W 1179 nt5.65□□□□□ -1.5
RFU1Q08003 YKL102CYKL102C 306 nt5.65□□□□□ -1.5
RFU1Q08003 MIA40YKL195W 1212 nt5.65□□□□□ -1.5
RFU1Q08003 YAR064WYAR064W 300 nt5.65□□□□□ -1.5
RFU1Q08003 TAF9YMR236W 474 nt5.65□□□□□ -1.5
RFU1Q08003 TKL1YPR074C 2043 nt5.64□□□□□ -1.51
RFU1Q08003 DFR1YOR236W 636 nt5.64□□□□□ -1.51
RFU1Q08003 YPL250W-AYPL250W-A 288 nt5.64□□□□□ -1.51
RFU1Q08003 YPR204WYPR204W 3099 nt5.64□□□□□ -1.51
RFU1Q08003 JIP4YDR475C 2631 nt5.63□□□□□ -1.51
RFU1Q08003 YPT1YFL038C 621 nt5.63□□□□□ -1.51
RFU1Q08003 YJR146WYJR146W 354 nt5.63□□□□□ -1.51
RFU1Q08003 TOS6YNL300W 309 nt5.63□□□□□ -1.51
RFU1Q08003 MRPS18YNL306W 654 nt5.63□□□□□ -1.51
RFU1Q08003 LSC1YOR142W 990 nt5.63□□□□□ -1.51
RFU1Q08003 MRPL23YOR150W 492 nt5.63□□□□□ -1.51
RFU1Q08003 YPL257WYPL257W 582 nt5.63□□□□□ -1.51
RFU1Q08003 RUF23RUF23 254 nt5.62□□□□□ -1.51
RFU1Q08003 HEM1YDR232W 1647 nt5.62□□□□□ -1.51
RFU1Q08003 ASN1YPR145W 1719 nt5.62□□□□□ -1.51
RFU1Q08003 BZZ1YHR114W 1902 nt5.62□□□□□ -1.51
RFU1Q08003 FAL1YDR021W 1200 nt5.61□□□□□ -1.51
RFU1Q08003 YDR387CYDR387C 1668 nt5.61□□□□□ -1.51
RFU1Q08003 SUF5tG(CCC)O 72 nt5.61□□□□□ -1.51
RFU1Q08003 XBP1YIL101C 1944 nt5.61□□□□□ -1.51
RFU1Q08003 STE13YOR219C 2796 nt5.61□□□□□ -1.51
RFU1Q08003 MRP51YPL118W 1035 nt5.61□□□□□ -1.51
RFU1Q08003 FAT3YKL187C 2253 nt5.6□□□□□ -1.51
RFU1Q08003 CRZ1YNL027W 2037 nt5.6□□□□□ -1.51
RFU1Q08003 HSP150YJL159W 1242 nt5.6□□□□□ -1.51
RFU1Q08003 YOL036WYOL036W 2286 nt5.6□□□□□ -1.51
RFU1Q08003 KEL1YHR158C 3495 nt5.6□□□□□ -1.51
RFU1Q08003 ESC8YOL017W 2145 nt5.59□□□□□ -1.51
RFU1Q08003 LYS1YIR034C 1122 nt5.59□□□□□ -1.51
RFU1Q08003 OGG1YML060W 1131 nt5.59□□□□□ -1.51
RFU1Q08003 GPT2YKR067W 2232 nt5.59□□□□□ -1.52
RFU1Q08003 FBA1YKL060C 1080 nt5.58□□□□□ -1.52
RFU1Q08003 YNL120CYNL120C 486 nt5.58□□□□□ -1.52
RFU1Q08003 SAL1YNL083W 1485 nt5.58□□□□□ -1.52
RFU1Q08003 TIM22YDL217C 624 nt5.57□□□□□ -1.52
RFU1Q08003 GCG1YER163C 699 nt5.57□□□□□ -1.52
RFU1Q08003 OM45YIL136W 1182 nt5.57□□□□□ -1.52
RFU1Q08003 GEP5YLR091W 882 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms