Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smad5P97454 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smad5P97454 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad5P97454 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smad5P97454 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smad5P97454 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.8■□□□□ 0.92
Smad5P97454 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smad5P97454 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smad5P97454 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.8■□□□□ 0.92
Smad5P97454 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smad5P97454 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad5P97454 Gm44428-201ENSMUST00000204474 874 ntBASIC20.79■□□□□ 0.92
Smad5P97454 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.79■□□□□ 0.92
Smad5P97454 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad5P97454 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smad5P97454 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smad5P97454 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smad5P97454 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smad5P97454 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.77■□□□□ 0.92
Smad5P97454 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad5P97454 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smad5P97454 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smad5P97454 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad5P97454 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smad5P97454 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smad5P97454 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.77■□□□□ 0.92
Smad5P97454 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smad5P97454 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.77■□□□□ 0.91
Smad5P97454 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Smad5P97454 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smad5P97454 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad5P97454 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad5P97454 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.76■□□□□ 0.91
Smad5P97454 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad5P97454 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smad5P97454 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smad5P97454 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smad5P97454 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smad5P97454 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smad5P97454 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smad5P97454 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smad5P97454 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Smad5P97454 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.73■□□□□ 0.91
Smad5P97454 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad5P97454 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smad5P97454 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smad5P97454 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smad5P97454 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smad5P97454 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.71■□□□□ 0.91
Smad5P97454 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad5P97454 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad5P97454 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smad5P97454 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Smad5P97454 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smad5P97454 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smad5P97454 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad5P97454 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad5P97454 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smad5P97454 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smad5P97454 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad5P97454 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smad5P97454 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.69■□□□□ 0.9
Smad5P97454 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smad5P97454 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Smad5P97454 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smad5P97454 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smad5P97454 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad5P97454 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smad5P97454 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.68■□□□□ 0.9
Smad5P97454 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Smad5P97454 Gm15546-201ENSMUST00000122095 826 ntBASIC20.67■□□□□ 0.9
Smad5P97454 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smad5P97454 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad5P97454 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smad5P97454 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad5P97454 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smad5P97454 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad5P97454 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.66■□□□□ 0.9
Smad5P97454 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad5P97454 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Smad5P97454 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad5P97454 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smad5P97454 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms