Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnfrsf11bO08712 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnfrsf11bO08712 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf11bO08712 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf11bO08712 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnfrsf11bO08712 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Tnfrsf11bO08712 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tnfrsf11bO08712 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Gm6311-201ENSMUST00000073790 878 ntBASIC22.3■■□□□ 1.16
Tnfrsf11bO08712 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms