Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf11bO08712 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Tnfrsf11bO08712 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.45■■□□□ 1.18
Tnfrsf11bO08712 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnfrsf11bO08712 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Tnfrsf11bO08712 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnfrsf11bO08712 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Tnfrsf11bO08712 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.4■■□□□ 1.18
Tnfrsf11bO08712 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnfrsf11bO08712 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnfrsf11bO08712 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf11bO08712 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf11bO08712 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf11bO08712 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnfrsf11bO08712 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf11bO08712 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf11bO08712 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf11bO08712 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf11bO08712 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Tnfrsf11bO08712 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tnfrsf11bO08712 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf11bO08712 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Tnfrsf11bO08712 Gm6311-201ENSMUST00000073790 878 ntBASIC22.3■■□□□ 1.16
Tnfrsf11bO08712 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms