Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1bO08603 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Raet1bO08603 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1bO08603 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1bO08603 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1bO08603 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Raet1bO08603 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.57■□□□□ 0.72
Raet1bO08603 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Raet1bO08603 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Raet1bO08603 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Raet1bO08603 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Raet1bO08603 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Raet1bO08603 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.55■□□□□ 0.72
Raet1bO08603 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Raet1bO08603 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
Raet1bO08603 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Raet1bO08603 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
Raet1bO08603 Gm44428-201ENSMUST00000204474 874 ntBASIC19.54■□□□□ 0.72
Raet1bO08603 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Raet1bO08603 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Raet1bO08603 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Raet1bO08603 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Raet1bO08603 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Raet1bO08603 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Raet1bO08603 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Raet1bO08603 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Raet1bO08603 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.52■□□□□ 0.71
Raet1bO08603 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Raet1bO08603 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Raet1bO08603 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Raet1bO08603 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Raet1bO08603 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Raet1bO08603 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Raet1bO08603 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Raet1bO08603 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.5■□□□□ 0.71
Raet1bO08603 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.5■□□□□ 0.71
Raet1bO08603 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Raet1bO08603 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Raet1bO08603 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Raet1bO08603 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Raet1bO08603 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1bO08603 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.48■□□□□ 0.71
Raet1bO08603 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1bO08603 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1bO08603 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1bO08603 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Raet1bO08603 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.47■□□□□ 0.71
Raet1bO08603 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raet1bO08603 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Raet1bO08603 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Raet1bO08603 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.46■□□□□ 0.71
Raet1bO08603 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.46■□□□□ 0.71
Raet1bO08603 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raet1bO08603 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.45■□□□□ 0.7
Raet1bO08603 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.45■□□□□ 0.7
Raet1bO08603 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Raet1bO08603 Gm11175-201ENSMUST00000116172 543 ntBASIC19.45■□□□□ 0.7
Raet1bO08603 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.45■□□□□ 0.7
Raet1bO08603 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Raet1bO08603 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1bO08603 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1bO08603 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Raet1bO08603 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Raet1bO08603 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1bO08603 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raet1bO08603 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Raet1bO08603 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Raet1bO08603 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.43■□□□□ 0.7
Raet1bO08603 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Raet1bO08603 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Raet1bO08603 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Raet1bO08603 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.42■□□□□ 0.7
Raet1bO08603 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raet1bO08603 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1bO08603 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Raet1bO08603 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raet1bO08603 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raet1bO08603 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Raet1bO08603 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Raet1bO08603 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms