Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav5-4A0A075B652 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18,32■□□□□ 0,52
Trav5-4A0A075B652 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18,32■□□□□ 0,52
Trav5-4A0A075B652 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18,32■□□□□ 0,52
Trav5-4A0A075B652 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18,32■□□□□ 0,52
Trav5-4A0A075B652 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18,31■□□□□ 0,52
Trav5-4A0A075B652 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Trav5-4A0A075B652 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Trav5-4A0A075B652 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18,3■□□□□ 0,52
Trav5-4A0A075B652 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18,3■□□□□ 0,52
Trav5-4A0A075B652 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18,3■□□□□ 0,52
Trav5-4A0A075B652 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18,29■□□□□ 0,52
Trav5-4A0A075B652 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18,29■□□□□ 0,52
Trav5-4A0A075B652 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18,29■□□□□ 0,52
Trav5-4A0A075B652 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Trav5-4A0A075B652 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18,28■□□□□ 0,52
Trav5-4A0A075B652 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Terc-201ENSMUST00000082862 423 ntBASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Trav5-4A0A075B652 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18,26■□□□□ 0,51
Trav5-4A0A075B652 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 Pkd1-207ENSMUST00000228550 1050 ntBASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18,25■□□□□ 0,51
Trav5-4A0A075B652 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18,24■□□□□ 0,51
Trav5-4A0A075B652 Gm6277-202ENSMUST00000224036 2779 ntBASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 Gm6934-201ENSMUST00000194780 1905 ntBASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18,23■□□□□ 0,51
Trav5-4A0A075B652 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18,22■□□□□ 0,51
Trav5-4A0A075B652 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18,21■□□□□ 0,51
Trav5-4A0A075B652 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18,21■□□□□ 0,51
Trav5-4A0A075B652 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18,21■□□□□ 0,51
Trav5-4A0A075B652 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18,21■□□□□ 0,51
Trav5-4A0A075B652 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18,2■□□□□ 0,5
Trav5-4A0A075B652 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18,19■□□□□ 0,5
Trav5-4A0A075B652 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Trav5-4A0A075B652 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18,18■□□□□ 0,5
Trav5-4A0A075B652 Gm6311-201ENSMUST00000073790 878 ntBASIC18,18■□□□□ 0,5
Trav5-4A0A075B652 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Trav5-4A0A075B652 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18,18■□□□□ 0,5
Retrieved 100 of 76,532 protein–RNA pairs in 34,3 ms