Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC116407.3-201ENST00000623905 1129 ntBASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA3Q9Y5H0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC046158.3-201ENST00000624947 2558 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AL356309.3-201ENST00000624132 1934 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PMS2P7-201ENST00000506558 1336 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC021087.4-201ENST00000563761 564 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 LINC00896-202ENST00000609602 2128 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 LINC01126-201ENST00000623515 1646 ntBASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA3Q9Y5H0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AC073592.3-201ENST00000625118 1834 ntBASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AC145285.3-201ENST00000564603 959 ntBASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 TERC-201ENST00000602385 541 ntBASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms