Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.183e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-205ENST00000595730 713 ntTSL 216.07■□□□□ 0.163e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-203ENST00000593532 2380 ntTSL 216.01■□□□□ 0.153e-6■■□□□ 12.8
CSTF2TQ9H0L4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.95■□□□□ 0.143e-6■■□□□ 12.8
CSTF2TQ9H0L4 EXOC5-208ENST00000556318 518 ntTSL 415.41■□□□□ 0.063e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-208ENST00000597157 856 ntTSL 1 (best)15.4■□□□□ 0.063e-6■■□□□ 12.8
CSTF2TQ9H0L4 THUMPD2-201ENST00000378727 2089 ntTSL 1 (best)15.39■□□□□ 0.053e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-207ENST00000597130 894 ntTSL 315.34■□□□□ 0.053e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-203ENST00000460341 565 ntTSL 415.18■□□□□ 0.023e-6■■□□□ 12.8
CSTF2TQ9H0L4 THUMPD2-208ENST00000530522 1561 ntTSL 215.07■□□□□ 03e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-209ENST00000597790 718 ntTSL 215.06■□□□□ 03e-6■■□□□ 12.8
CSTF2TQ9H0L4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.143e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-206ENST00000463448 1589 ntTSL 1 (best)14□□□□□ -0.173e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-209ENST00000473166 752 ntTSL 313.81□□□□□ -0.23e-6■■□□□ 12.8
CSTF2TQ9H0L4 NR1H2-212ENST00000600355 507 ntTSL 313.51□□□□□ -0.253e-6■■□□□ 12.8
CSTF2TQ9H0L4 IQGAP1-208ENST00000559809 1201 ntTSL 313.48□□□□□ -0.253e-6■■□□□ 12.8
CSTF2TQ9H0L4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.263e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-214ENST00000457004 668 ntTSL 313.05□□□□□ -0.323e-9■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.64□□□□□ -0.393e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC12.42□□□□□ -0.423e-6■■□□□ 12.8
CSTF2TQ9H0L4 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.483e-6■■□□□ 12.8
CSTF2TQ9H0L4 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC11.99□□□□□ -0.493e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-212ENST00000540847 2485 ntTSL 211.84□□□□□ -0.513e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-211ENST00000473807 559 ntTSL 411.62□□□□□ -0.553e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-213ENST00000478732 344 ntTSL 511.6□□□□□ -0.553e-6■■□□□ 12.8
CSTF2TQ9H0L4 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC11.41□□□□□ -0.583e-6■■□□□ 12.8
CSTF2TQ9H0L4 EXOC5-207ENST00000555749 594 ntTSL 211.33□□□□□ -0.63e-6■■□□□ 12.8
CSTF2TQ9H0L4 TTLL3-208ENST00000426827 756 ntTSL 411.11□□□□□ -0.633e-6■■□□□ 12.8
CSTF2TQ9H0L4 TTLL3-214ENST00000431204 1041 ntTSL 511.11□□□□□ -0.633e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-205ENST00000463100 502 ntTSL 410.21□□□□□ -0.773e-6■■□□□ 12.8
CSTF2TQ9H0L4 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.883e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC9.5□□□□□ -0.893e-9■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.943e-9■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC9.02□□□□□ -0.963e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-209ENST00000447829 608 ntTSL 1 (best)8.87□□□□□ -0.993e-9■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC8.59□□□□□ -1.033e-9■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC8.51□□□□□ -1.053e-9■■□□□ 12.8
CSTF2TQ9H0L4 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.063e-6■■□□□ 12.8
CSTF2TQ9H0L4 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.093e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-208ENST00000510237 6548 ntTSL 1 (best)7.98□□□□□ -1.133e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-213ENST00000456676 2230 ntTSL 1 (best)7.55□□□□□ -1.23e-9■■□□□ 12.8
CSTF2TQ9H0L4 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.52□□□□□ -1.213e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-211ENST00000513432 8635 ntTSL 1 (best)7.06□□□□□ -1.283e-6■■□□□ 12.8
CSTF2TQ9H0L4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.75□□□□□ -1.333e-6■■□□□ 12.8
CSTF2TQ9H0L4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.62□□□□□ -1.353e-6■■□□□ 12.8
CSTF2TQ9H0L4 THUMPD2-203ENST00000460072 3148 ntTSL 1 (best)6.6□□□□□ -1.353e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-207ENST00000441265 917 ntTSL 56.52□□□□□ -1.373e-9■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-215ENST00000589993 3284 ntTSL 56.25□□□□□ -1.413e-6■■□□□ 12.8
CSTF2TQ9H0L4 TMEM14B-207ENST00000467229 483 ntTSL 36.16□□□□□ -1.423e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-215ENST00000458009 660 ntTSL 1 (best)6.07□□□□□ -1.443e-9■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.99□□□□□ -1.453e-9■■□□□ 12.8
CSTF2TQ9H0L4 FANCB-203ENST00000452869 2712 ntTSL 1 (best)5.88□□□□□ -1.473e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-209ENST00000511820 6455 ntTSL 1 (best)5.86□□□□□ -1.473e-6■■□□□ 12.8
CSTF2TQ9H0L4 SLC7A11-202ENST00000509248 797 ntTSL 55.57□□□□□ -1.523e-9■■□□□ 12.8
CSTF2TQ9H0L4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.27□□□□□ -1.573e-6■■□□□ 12.8
CSTF2TQ9H0L4 BMP2K-203ENST00000502613 6902 ntTSL 1 (best)5.03□□□□□ -1.63e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.653e-6■■□□□ 12.8
CSTF2TQ9H0L4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.73e-6■■□□□ 12.8
CSTF2TQ9H0L4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.793e-9■■□□□ 12.8
CSTF2TQ9H0L4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.31□□□□□ -1.241e-6■■□□□ 12.8
CSTF2TQ9H0L4 AC016831.1-202ENST00000447307 726 ntTSL 37.07□□□□□ -1.281e-6■■□□□ 12.8
CSTF2TQ9H0L4 AC016831.1-203ENST00000418546 578 ntTSL 46.07□□□□□ -1.441e-6■■□□□ 12.8
CSTF2TQ9H0L4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.92■□□□□ 0.782e-6■■□□□ 12.8
CSTF2TQ9H0L4 PCNT-208ENST00000490468 1415 ntTSL 512.28□□□□□ -0.442e-6■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-210ENST00000525701 1794 ntTSL 518.93■□□□□ 0.623e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.573e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.573e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.543e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.473e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-213ENST00000528713 1202 ntTSL 1 (best)17.54■□□□□ 0.43e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.323e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-207ENST00000524464 624 ntTSL 516.85■□□□□ 0.293e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.273e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.133e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-212ENST00000527485 873 ntTSL 214.58□□□□□ -0.083e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-215ENST00000529306 870 ntTSL 314.58□□□□□ -0.083e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-218ENST00000531149 709 ntTSL 314.43□□□□□ -0.13e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-214ENST00000529115 855 ntTSL 314.3□□□□□ -0.123e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-208ENST00000524780 1059 ntTSL 212.45□□□□□ -0.423e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-209ENST00000525522 3281 ntTSL 1 (best)12.21□□□□□ -0.453e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-211ENST00000526295 488 ntTSL 310.37□□□□□ -0.753e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-221ENST00000532055 704 ntTSL 38.11□□□□□ -1.113e-7■■□□□ 12.7
CSTF2TQ9H0L4 RNH1-220ENST00000531540 480 ntTSL 26.01□□□□□ -1.453e-7■■□□□ 12.7
CSTF2TQ9H0L4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.352e-7■■□□□ 12.7
CSTF2TQ9H0L4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.182e-7■■□□□ 12.7
CSTF2TQ9H0L4 ARHGEF1-207ENST00000594258 919 ntTSL 318.47■□□□□ 0.552e-8■■□□□ 12.7
CSTF2TQ9H0L4 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)16.27■□□□□ 0.22e-8■■□□□ 12.7
CSTF2TQ9H0L4 AXIN2-207ENST00000585045 1034 ntTSL 219.02■□□□□ 0.644e-10■■□□□ 12.7
CSTF2TQ9H0L4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.08■■□□□ 1.136e-7■■□□□ 12.7
CSTF2TQ9H0L4 RGL2-237ENST00000425946 640 ntTSL 321.7■■□□□ 1.062e-6■■□□□ 12.7
CSTF2TQ9H0L4 QKI-204ENST00000361758 6085 ntTSL 521.69■■□□□ 1.066e-7■■□□□ 12.7
CSTF2TQ9H0L4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.72■□□□□ 0.756e-7■■□□□ 12.7
CSTF2TQ9H0L4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19■□□□□ 0.636e-7■■□□□ 12.7
CSTF2TQ9H0L4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.64■□□□□ 0.576e-7■■□□□ 12.7
CSTF2TQ9H0L4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.77■□□□□ 0.126e-7■■□□□ 12.7
CSTF2TQ9H0L4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.96□□□□□ -0.176e-7■■□□□ 12.7
CSTF2TQ9H0L4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.26e-7■■□□□ 12.7
CSTF2TQ9H0L4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.266e-7■■□□□ 12.7
CSTF2TQ9H0L4 PHF19-204ENST00000436309 558 ntTSL 410.96□□□□□ -0.656e-7■■□□□ 12.7
CSTF2TQ9H0L4 FGF13-206ENST00000448673 652 ntTSL 59.07□□□□□ -0.966e-7■■□□□ 12.7
Retrieved 100 of 19,151 protein–RNA pairs in 167.6 ms