Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USB1Q9BQ65 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.7■□□□□ 0.1
USB1Q9BQ65 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 ARL4AP4-201ENST00000434170 518 ntBASIC15.69■□□□□ 0.1
USB1Q9BQ65 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 AP005901.3-202ENST00000581653 237 ntBASIC15.69■□□□□ 0.1
USB1Q9BQ65 AL138831.2-201ENST00000606564 490 ntBASIC15.69■□□□□ 0.1
USB1Q9BQ65 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.69■□□□□ 0.1
USB1Q9BQ65 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USB1Q9BQ65 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC125634.1-201ENST00000438758 1403 ntBASIC15.68■□□□□ 0.1
USB1Q9BQ65 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 SAPCD2P3-201ENST00000455031 850 ntBASIC15.68■□□□□ 0.1
USB1Q9BQ65 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 BNIP3P18-201ENST00000593976 575 ntBASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.68■□□□□ 0.1
USB1Q9BQ65 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.68■□□□□ 0.1
USB1Q9BQ65 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USB1Q9BQ65 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms