Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM5Q96HC4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 LINC02012-201ENST00000608206 1725 ntBASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 AC132938.5-201ENST00000624980 1813 ntBASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 AC003669.1-201ENST00000334569 611 ntBASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 AC092329.2-201ENST00000598402 547 ntBASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM5Q96HC4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 RCN1P2-201ENST00000398357 915 ntBASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 STK19B-204ENST00000512515 211 ntBASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 AC012615.1-201ENST00000565797 1299 ntBASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM5Q96HC4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PDLIM5Q96HC4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms