Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Gm11745-201ENSMUST00000121669 448 ntBASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sfr1Q8BP27 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm13464-201ENSMUST00000119418 935 ntBASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sfr1Q8BP27 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sfr1Q8BP27 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm23935-201ENSMUST00000102303 57 ntBASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm24270-201ENSMUST00000102326 57 ntBASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm24245-201ENSMUST00000157318 57 ntBASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Chchd1-203ENSMUST00000224633 557 ntBASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm5867-201ENSMUST00000063197 592 ntBASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms