Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 AC122714.2-201ENST00000502787 707 ntBASIC15.83■□□□□ 0.12
RTL6Q6ICC9 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 AC145285.3-201ENST00000564603 959 ntBASIC15.83■□□□□ 0.12
RTL6Q6ICC9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 PMPCAP1-201ENST00000508114 1576 ntBASIC15.83■□□□□ 0.12
RTL6Q6ICC9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.83■□□□□ 0.12
RTL6Q6ICC9 HLA-J-201ENST00000462773 1622 ntBASIC15.83■□□□□ 0.12
RTL6Q6ICC9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AP000997.3-201ENST00000623333 2250 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 MIR940-201ENST00000401276 94 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC092910.1-201ENST00000482027 1129 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AD001527.2-201ENST00000622994 785 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC008735.5-201ENST00000623544 497 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 ZNF259P1-201ENST00000407656 1365 ntBASIC15.82■□□□□ 0.12
RTL6Q6ICC9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RTL6Q6ICC9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AC098831.1-202ENST00000438821 336 ntBASIC15.81■□□□□ 0.12
RTL6Q6ICC9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 BX005266.1-201ENST00000473402 457 ntBASIC15.81■□□□□ 0.12
RTL6Q6ICC9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AC104109.2-201ENST00000602919 1418 ntBASIC15.81■□□□□ 0.12
RTL6Q6ICC9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AC079776.2-201ENST00000641154 1609 ntBASIC15.81■□□□□ 0.12
RTL6Q6ICC9 AC107918.4-202ENST00000641623 219 ntBASIC15.81■□□□□ 0.12
RTL6Q6ICC9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTL6Q6ICC9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms