Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CDKL1Q00532 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDKL1Q00532 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 COX5BP2-201ENST00000392354 334 ntBASIC17.26■□□□□ 0.35
CDKL1Q00532 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL1Q00532 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.26■□□□□ 0.35
CDKL1Q00532 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.26■□□□□ 0.35
CDKL1Q00532 AC124864.1-201ENST00000623408 392 ntBASIC17.26■□□□□ 0.35
CDKL1Q00532 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.26■□□□□ 0.35
CDKL1Q00532 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDKL1Q00532 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDKL1Q00532 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 AL023806.1-201ENST00000603994 1649 ntBASIC17.25■□□□□ 0.35
CDKL1Q00532 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.25■□□□□ 0.35
CDKL1Q00532 AC246785.2-201ENST00000432512 513 ntBASIC17.25■□□□□ 0.35
CDKL1Q00532 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL1Q00532 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 AL121672.3-201ENST00000608644 468 ntBASIC17.25■□□□□ 0.35
CDKL1Q00532 IGHV3-41-201ENST00000613121 348 ntBASIC17.25■□□□□ 0.35
CDKL1Q00532 AC116407.4-201ENST00000623319 1061 ntBASIC17.25■□□□□ 0.35
CDKL1Q00532 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL1Q00532 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL1Q00532 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.25■□□□□ 0.35
CDKL1Q00532 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDKL1Q00532 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDKL1Q00532 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 PCDH8P1-201ENST00000428983 2773 ntBASIC17.24■□□□□ 0.35
CDKL1Q00532 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.24■□□□□ 0.35
CDKL1Q00532 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDKL1Q00532 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDKL1Q00532 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL1Q00532 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDKL1Q00532 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL1Q00532 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 AC002558.1-201ENST00000488906 803 ntBASIC17.24■□□□□ 0.35
CDKL1Q00532 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.24■□□□□ 0.35
CDKL1Q00532 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
CDKL1Q00532 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CDKL1Q00532 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.24■□□□□ 0.35
CDKL1Q00532 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDKL1Q00532 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDKL1Q00532 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms