Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.33■□□□□ 0.52
HADHBP55084 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.33■□□□□ 0.52
HADHBP55084 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HADHBP55084 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.32■□□□□ 0.52
HADHBP55084 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HADHBP55084 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.32■□□□□ 0.52
HADHBP55084 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.32■□□□□ 0.52
HADHBP55084 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.32■□□□□ 0.52
HADHBP55084 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 AC124864.1-201ENST00000623408 392 ntBASIC18.32■□□□□ 0.52
HADHBP55084 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HADHBP55084 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 FLJ38576-201ENST00000623820 2459 ntBASIC18.32■□□□□ 0.52
HADHBP55084 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
HADHBP55084 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.32■□□□□ 0.52
HADHBP55084 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HADHBP55084 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 BCL2-203ENST00000589955 5011 ntBASIC18.31■□□□□ 0.52
HADHBP55084 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 AL136038.3-201ENST00000561909 1096 ntBASIC18.31■□□□□ 0.52
HADHBP55084 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 AC011498.5-201ENST00000592027 486 ntBASIC18.31■□□□□ 0.52
HADHBP55084 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
HADHBP55084 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HADHBP55084 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
HADHBP55084 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HADHBP55084 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HADHBP55084 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HADHBP55084 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HADHBP55084 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.3■□□□□ 0.52
HADHBP55084 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.3■□□□□ 0.52
HADHBP55084 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.3■□□□□ 0.52
HADHBP55084 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.3■□□□□ 0.52
HADHBP55084 KRT8P26-201ENST00000534154 1276 ntBASIC18.3■□□□□ 0.52
HADHBP55084 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHBP55084 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms