Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.82■■□□□ 1.56
CLTCL1P53675 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC24.82■■□□□ 1.56
CLTCL1P53675 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC24.82■■□□□ 1.56
CLTCL1P53675 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 NEK7-201ENST00000367383 586 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLTCL1P53675 KRT8P48-201ENST00000515599 1220 ntBASIC24.82■■□□□ 1.56
CLTCL1P53675 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC24.82■■□□□ 1.56
CLTCL1P53675 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
CLTCL1P53675 AC087289.5-201ENST00000586076 3175 ntBASIC24.82■■□□□ 1.56
CLTCL1P53675 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CLTCL1P53675 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.82■■□□□ 1.56
CLTCL1P53675 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC24.81■■□□□ 1.56
CLTCL1P53675 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC24.81■■□□□ 1.56
CLTCL1P53675 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CLTCL1P53675 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CLTCL1P53675 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC24.81■■□□□ 1.56
CLTCL1P53675 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLTCL1P53675 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC24.8■■□□□ 1.56
CLTCL1P53675 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC24.8■■□□□ 1.56
CLTCL1P53675 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC24.8■■□□□ 1.56
CLTCL1P53675 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC24.8■■□□□ 1.56
CLTCL1P53675 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.8■■□□□ 1.56
CLTCL1P53675 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC24.8■■□□□ 1.56
CLTCL1P53675 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CLTCL1P53675 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLTCL1P53675 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.8■■□□□ 1.56
CLTCL1P53675 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.8■■□□□ 1.56
CLTCL1P53675 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 AC093512.1-201ENST00000617969 520 ntBASIC24.79■■□□□ 1.56
CLTCL1P53675 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC24.79■■□□□ 1.56
CLTCL1P53675 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC24.79■■□□□ 1.56
CLTCL1P53675 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CLTCL1P53675 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC24.79■■□□□ 1.56
CLTCL1P53675 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.79■■□□□ 1.56
CLTCL1P53675 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC24.79■■□□□ 1.56
CLTCL1P53675 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.79■■□□□ 1.56
CLTCL1P53675 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CLTCL1P53675 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC24.78■■□□□ 1.56
CLTCL1P53675 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.78■■□□□ 1.56
CLTCL1P53675 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC24.78■■□□□ 1.56
CLTCL1P53675 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CLTCL1P53675 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CLTCL1P53675 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 AL135744.1-201ENST00000565098 629 ntBASIC24.78■■□□□ 1.56
CLTCL1P53675 AC005498.2-205ENST00000593218 784 ntBASIC24.78■■□□□ 1.56
CLTCL1P53675 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CLTCL1P53675 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC24.77■■□□□ 1.56
CLTCL1P53675 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC24.77■■□□□ 1.56
CLTCL1P53675 AL121761.2-201ENST00000598007 1648 ntBASIC24.77■■□□□ 1.56
CLTCL1P53675 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLTCL1P53675 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLTCL1P53675 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
CLTCL1P53675 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CLTCL1P53675 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CLTCL1P53675 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC24.77■■□□□ 1.56
CLTCL1P53675 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.77■■□□□ 1.56
CLTCL1P53675 TIMM8BP1-201ENST00000452384 211 ntBASIC24.77■■□□□ 1.56
CLTCL1P53675 HLA-J-203ENST00000494367 1087 ntBASIC24.77■■□□□ 1.56
CLTCL1P53675 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC24.77■■□□□ 1.56
CLTCL1P53675 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC24.77■■□□□ 1.56
CLTCL1P53675 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLTCL1P53675 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms