Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.48■□□□□ 0.71
HTTP42858 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.48■□□□□ 0.71
HTTP42858 AC004945.1-201ENST00000416738 983 ntBASIC19.48■□□□□ 0.71
HTTP42858 ACTG1P4-201ENST00000425123 1122 ntBASIC19.48■□□□□ 0.71
HTTP42858 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HTTP42858 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTTP42858 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.48■□□□□ 0.71
HTTP42858 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.48■□□□□ 0.71
HTTP42858 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HTTP42858 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HTTP42858 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.48■□□□□ 0.71
HTTP42858 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HTTP42858 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.48■□□□□ 0.71
HTTP42858 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.47■□□□□ 0.71
HTTP42858 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 AC009477.1-201ENST00000452936 217 ntBASIC19.47■□□□□ 0.71
HTTP42858 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.47■□□□□ 0.71
HTTP42858 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.47■□□□□ 0.71
HTTP42858 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HTTP42858 AKAP8P1-201ENST00000434743 1349 ntBASIC19.47■□□□□ 0.71
HTTP42858 AC116562.4-201ENST00000641316 2276 ntBASIC19.47■□□□□ 0.71
HTTP42858 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
HTTP42858 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.47■□□□□ 0.71
HTTP42858 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 AL138828.2-201ENST00000615812 383 ntBASIC19.47■□□□□ 0.71
HTTP42858 AL162274.1-201ENST00000617191 1098 ntBASIC19.47■□□□□ 0.71
HTTP42858 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.47■□□□□ 0.71
HTTP42858 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HTTP42858 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.46■□□□□ 0.71
HTTP42858 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HTTP42858 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 AC073130.3-201ENST00000624389 2278 ntBASIC19.46■□□□□ 0.71
HTTP42858 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.46■□□□□ 0.71
HTTP42858 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.46■□□□□ 0.71
HTTP42858 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 RARRES2P8-201ENST00000566335 367 ntBASIC19.46■□□□□ 0.71
HTTP42858 AC109462.3-201ENST00000573934 613 ntBASIC19.46■□□□□ 0.71
HTTP42858 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.46■□□□□ 0.71
HTTP42858 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.46■□□□□ 0.71
HTTP42858 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.46■□□□□ 0.71
HTTP42858 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.46■□□□□ 0.71
HTTP42858 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.46■□□□□ 0.71
HTTP42858 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HTTP42858 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HTTP42858 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HTTP42858 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
HTTP42858 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HTTP42858 KRT17P7-201ENST00000451704 1104 ntBASIC19.45■□□□□ 0.7
HTTP42858 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.45■□□□□ 0.7
HTTP42858 AC009407.1-201ENST00000568958 598 ntBASIC19.45■□□□□ 0.7
HTTP42858 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.45■□□□□ 0.7
HTTP42858 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.45■□□□□ 0.7
HTTP42858 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HTTP42858 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.45■□□□□ 0.7
HTTP42858 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.45■□□□□ 0.7
HTTP42858 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms