Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLCN1P35523 AC144831.1-201ENST00000573312 2656 ntBASIC19.97■□□□□ 0.79
CLCN1P35523 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLCN1P35523 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCN1P35523 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCN1P35523 FITM1-202ENST00000559294 800 ntBASIC19.97■□□□□ 0.79
CLCN1P35523 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 MIR4674-201ENST00000582457 87 ntBASIC19.97■□□□□ 0.79
CLCN1P35523 MIR4497-201ENST00000583208 89 ntBASIC19.97■□□□□ 0.79
CLCN1P35523 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 AL023803.3-201ENST00000615559 522 ntBASIC19.97■□□□□ 0.79
CLCN1P35523 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN1P35523 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLCN1P35523 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN1P35523 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLCN1P35523 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLCN1P35523 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN1P35523 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN1P35523 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CLCN1P35523 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLCN1P35523 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.96■□□□□ 0.79
CLCN1P35523 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.96■□□□□ 0.79
CLCN1P35523 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN1P35523 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CLCN1P35523 AC126177.1-201ENST00000547829 2218 ntBASIC19.96■□□□□ 0.79
CLCN1P35523 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCN1P35523 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCN1P35523 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLCN1P35523 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLCN1P35523 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCN1P35523 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLCN1P35523 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.95■□□□□ 0.78
CLCN1P35523 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 KRT17P2-201ENST00000300992 1314 ntBASIC19.95■□□□□ 0.78
CLCN1P35523 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
CLCN1P35523 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLCN1P35523 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCN1P35523 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.95■□□□□ 0.78
CLCN1P35523 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLCN1P35523 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CLCN1P35523 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLCN1P35523 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms