Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RN7SL510P-201ENST00000581311 263 ntBASIC17.51■□□□□ 0.39
XRCC1P18887 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
XRCC1P18887 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 AC005336.2-201ENST00000593183 939 ntBASIC17.51■□□□□ 0.39
XRCC1P18887 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.51■□□□□ 0.39
XRCC1P18887 IFNL4P1-201ENST00000607083 540 ntBASIC17.51■□□□□ 0.39
XRCC1P18887 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.51■□□□□ 0.39
XRCC1P18887 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
XRCC1P18887 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.51■□□□□ 0.39
XRCC1P18887 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.51■□□□□ 0.39
XRCC1P18887 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC093010.1-201ENST00000473625 1624 ntBASIC17.5■□□□□ 0.39
XRCC1P18887 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AC004870.1-201ENST00000315132 882 ntBASIC17.5■□□□□ 0.39
XRCC1P18887 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC1P18887 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC112698.1-201ENST00000510299 916 ntBASIC17.5■□□□□ 0.39
XRCC1P18887 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.5■□□□□ 0.39
XRCC1P18887 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AC132938.6-201ENST00000623828 1655 ntBASIC17.5■□□□□ 0.39
XRCC1P18887 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
XRCC1P18887 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.5■□□□□ 0.39
XRCC1P18887 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XRCC1P18887 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
XRCC1P18887 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
XRCC1P18887 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.49■□□□□ 0.39
XRCC1P18887 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
XRCC1P18887 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
XRCC1P18887 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.49■□□□□ 0.39
XRCC1P18887 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.49■□□□□ 0.39
XRCC1P18887 FAAHP1-202ENST00000446499 1238 ntBASIC17.49■□□□□ 0.39
XRCC1P18887 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.49■□□□□ 0.39
XRCC1P18887 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.49■□□□□ 0.39
XRCC1P18887 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
XRCC1P18887 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.49■□□□□ 0.39
XRCC1P18887 BNIP3P18-201ENST00000593976 575 ntBASIC17.49■□□□□ 0.39
XRCC1P18887 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XRCC1P18887 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
XRCC1P18887 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XRCC1P18887 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms