Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TOB2P1-201ENST00000469761 992 ntBASIC17.29■□□□□ 0.36
CAPN1P07384 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPN1P07384 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN1P07384 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.29■□□□□ 0.36
CAPN1P07384 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CAPN1P07384 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPN1P07384 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPN1P07384 AL023806.1-201ENST00000603994 1649 ntBASIC17.29■□□□□ 0.36
CAPN1P07384 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
CAPN1P07384 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN1P07384 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 RN7SL606P-201ENST00000472779 293 ntBASIC17.28■□□□□ 0.36
CAPN1P07384 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 AP000867.3-201ENST00000524675 377 ntBASIC17.28■□□□□ 0.36
CAPN1P07384 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPN1P07384 RN7SL510P-201ENST00000581311 263 ntBASIC17.28■□□□□ 0.36
CAPN1P07384 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPN1P07384 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN1P07384 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPN1P07384 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPN1P07384 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPN1P07384 AL138688.1-201ENST00000624851 1594 ntBASIC17.28■□□□□ 0.36
CAPN1P07384 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPN1P07384 KRT8P47-201ENST00000604727 1398 ntBASIC17.28■□□□□ 0.36
CAPN1P07384 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CAPN1P07384 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CAPN1P07384 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.36
CAPN1P07384 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPN1P07384 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.27■□□□□ 0.36
CAPN1P07384 AC012615.1-201ENST00000565797 1299 ntBASIC17.27■□□□□ 0.36
CAPN1P07384 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 IGHV3-41-201ENST00000613121 348 ntBASIC17.27■□□□□ 0.36
CAPN1P07384 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPN1P07384 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN1P07384 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN1P07384 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CAPN1P07384 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.27■□□□□ 0.35
CAPN1P07384 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CAPN1P07384 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CAPN1P07384 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.27■□□□□ 0.35
CAPN1P07384 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN1P07384 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPN1P07384 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CAPN1P07384 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CAPN1P07384 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CAPN1P07384 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN1P07384 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 HLA-J-201ENST00000462773 1622 ntBASIC17.26■□□□□ 0.35
CAPN1P07384 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN1P07384 REXO1L11P-201ENST00000620964 1927 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms