Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP3BO95985 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 RPS8P6-201ENST00000426177 609 ntBASIC17.98■□□□□ 0.47
TOP3BO95985 KRT18P67-201ENST00000432816 1264 ntBASIC17.98■□□□□ 0.47
TOP3BO95985 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.98■□□□□ 0.47
TOP3BO95985 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.98■□□□□ 0.47
TOP3BO95985 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP3BO95985 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.98■□□□□ 0.47
TOP3BO95985 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP3BO95985 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.98■□□□□ 0.47
TOP3BO95985 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.98■□□□□ 0.47
TOP3BO95985 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TOP3BO95985 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TOP3BO95985 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TOP3BO95985 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 HTR7P1-202ENST00000624664 4411 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TOP3BO95985 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP3BO95985 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP3BO95985 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.97■□□□□ 0.47
TOP3BO95985 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.97■□□□□ 0.47
TOP3BO95985 AC091607.1-201ENST00000490318 1060 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 AP005901.3-202ENST00000581653 237 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.97■□□□□ 0.47
TOP3BO95985 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TOP3BO95985 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TOP3BO95985 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 NSUN5P1-202ENST00000421140 1535 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 NSUN5P2-203ENST00000457352 1529 ntBASIC17.97■□□□□ 0.47
TOP3BO95985 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOP3BO95985 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.96■□□□□ 0.47
TOP3BO95985 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.96■□□□□ 0.47
TOP3BO95985 AL390719.2-201ENST00000606993 987 ntBASIC17.96■□□□□ 0.47
TOP3BO95985 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.96■□□□□ 0.47
TOP3BO95985 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOP3BO95985 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.96■□□□□ 0.47
TOP3BO95985 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms