Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 AC104692.2-201ENST00000603054 253 ntBASIC17.76■□□□□ 0.43
PRAMEF11O60813 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 AL031008.1-201ENST00000619963 541 ntBASIC17.76■□□□□ 0.43
PRAMEF11O60813 TP73-AS1-207ENST00000624167 988 ntBASIC17.76■□□□□ 0.43
PRAMEF11O60813 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 AL022326.1-202ENST00000641533 845 ntBASIC17.76■□□□□ 0.43
PRAMEF11O60813 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRAMEF11O60813 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
PRAMEF11O60813 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.75■□□□□ 0.43
PRAMEF11O60813 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
PRAMEF11O60813 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 PP12613-201ENST00000424958 2230 ntBASIC17.75■□□□□ 0.43
PRAMEF11O60813 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEF11O60813 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 AL135999.2-201ENST00000622438 1686 ntBASIC17.74■□□□□ 0.43
PRAMEF11O60813 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 AC016396.2-201ENST00000562575 1417 ntBASIC17.74■□□□□ 0.43
PRAMEF11O60813 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 AC021087.4-201ENST00000563761 564 ntBASIC17.74■□□□□ 0.43
PRAMEF11O60813 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEF11O60813 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEF11O60813 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms