Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL023284.2-201ENST00000405850 579 ntBASIC24.02■■□□□ 1.44
MSH5O43196 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24.02■■□□□ 1.44
MSH5O43196 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.02■■□□□ 1.44
MSH5O43196 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC24.02■■□□□ 1.44
MSH5O43196 AC013731.1-201ENST00000604340 883 ntBASIC24.02■■□□□ 1.44
MSH5O43196 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.02■■□□□ 1.44
MSH5O43196 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.02■■□□□ 1.44
MSH5O43196 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
MSH5O43196 IL9RP2-201ENST00000423948 1312 ntBASIC24.02■■□□□ 1.44
MSH5O43196 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.02■■□□□ 1.44
MSH5O43196 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 AC018695.7-201ENST00000624587 2492 ntBASIC24.02■■□□□ 1.44
MSH5O43196 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
MSH5O43196 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC24.01■■□□□ 1.43
MSH5O43196 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 MIR1233-2-201ENST00000408138 82 ntBASIC24.01■■□□□ 1.43
MSH5O43196 MIR1233-1-201ENST00000408722 82 ntBASIC24.01■■□□□ 1.43
MSH5O43196 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC24.01■■□□□ 1.43
MSH5O43196 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.01■■□□□ 1.43
MSH5O43196 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 AC106730.3-201ENST00000624568 641 ntBASIC24.01■■□□□ 1.43
MSH5O43196 AC112497.1-201ENST00000624824 639 ntBASIC24.01■■□□□ 1.43
MSH5O43196 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MSH5O43196 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
MSH5O43196 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
MSH5O43196 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.01■■□□□ 1.43
MSH5O43196 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24■■□□□ 1.43
MSH5O43196 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
MSH5O43196 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24■■□□□ 1.43
MSH5O43196 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24■■□□□ 1.43
MSH5O43196 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24■■□□□ 1.43
MSH5O43196 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC24■■□□□ 1.43
MSH5O43196 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
MSH5O43196 VN1R48P-201ENST00000448149 1036 ntBASIC24■■□□□ 1.43
MSH5O43196 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24■■□□□ 1.43
MSH5O43196 MOK-208ENST00000519058 917 ntTSL 2 BASIC24■■□□□ 1.43
MSH5O43196 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
MSH5O43196 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC24■■□□□ 1.43
MSH5O43196 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24■■□□□ 1.43
MSH5O43196 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
MSH5O43196 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24■■□□□ 1.43
MSH5O43196 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC24■■□□□ 1.43
MSH5O43196 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
MSH5O43196 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC24■■□□□ 1.43
MSH5O43196 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC23.99■■□□□ 1.43
MSH5O43196 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
MSH5O43196 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
MSH5O43196 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
MSH5O43196 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.99■■□□□ 1.43
MSH5O43196 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
MSH5O43196 MCCD1P1-208ENST00000445732 328 ntBASIC23.99■■□□□ 1.43
MSH5O43196 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.99■■□□□ 1.43
MSH5O43196 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC23.99■■□□□ 1.43
MSH5O43196 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.99■■□□□ 1.43
MSH5O43196 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC23.99■■□□□ 1.43
MSH5O43196 AC091515.1-201ENST00000548110 679 ntBASIC23.99■■□□□ 1.43
MSH5O43196 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.99■■□□□ 1.43
MSH5O43196 AP001005.1-201ENST00000571755 1248 ntBASIC23.99■■□□□ 1.43
MSH5O43196 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.99■■□□□ 1.43
MSH5O43196 MIR3180-5-201ENST00000583743 153 ntBASIC23.99■■□□□ 1.43
MSH5O43196 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
MSH5O43196 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms