Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PCDH17O14917 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDH17O14917 MIR5100-201ENST00000579544 119 ntBASIC16.77■□□□□ 0.28
PCDH17O14917 AC005336.2-201ENST00000593183 939 ntBASIC16.77■□□□□ 0.28
PCDH17O14917 AC011467.2-201ENST00000598425 242 ntBASIC16.77■□□□□ 0.28
PCDH17O14917 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH17O14917 REXO1L6P-202ENST00000619970 1078 ntBASIC16.77■□□□□ 0.28
PCDH17O14917 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH17O14917 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH17O14917 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
PCDH17O14917 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH17O14917 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH17O14917 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH17O14917 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH17O14917 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH17O14917 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH17O14917 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 TP73-AS1-210ENST00000637775 1455 ntBASIC16.76■□□□□ 0.27
PCDH17O14917 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH17O14917 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDH17O14917 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PCDH17O14917 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 EMBP1-201ENST00000458200 901 ntBASIC16.76■□□□□ 0.27
PCDH17O14917 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH17O14917 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH17O14917 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDH17O14917 AC064862.7-201ENST00000604520 867 ntBASIC16.76■□□□□ 0.27
PCDH17O14917 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH17O14917 OR6D1P-202ENST00000641007 5290 ntBASIC16.76■□□□□ 0.27
PCDH17O14917 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH17O14917 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDH17O14917 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH17O14917 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PCDH17O14917 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH17O14917 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCDH17O14917 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH17O14917 RBM17P3-201ENST00000417687 1192 ntBASIC16.75■□□□□ 0.27
PCDH17O14917 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH17O14917 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 AL662844.1-201ENST00000546340 181 ntBASIC16.75■□□□□ 0.27
PCDH17O14917 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH17O14917 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH17O14917 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 AL121912.1-201ENST00000603683 238 ntBASIC16.75■□□□□ 0.27
PCDH17O14917 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH17O14917 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PCDH17O14917 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH17O14917 KRT18P55-202ENST00000578578 1546 ntBASIC16.75■□□□□ 0.27
PCDH17O14917 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH17O14917 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms