Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 KRT8P26-201ENST00000534154 1276 ntBASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 PRELID1P1-202ENST00000567272 903 ntBASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DDX49Q9Y6V7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 AL845331.1-201ENST00000424978 1190 ntBASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX49Q9Y6V7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 KRT18P1-202ENST00000452408 1331 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 RN7SL510P-201ENST00000581311 263 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 AL732292.2-201ENST00000609649 430 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 HOXB1-202ENST00000577092 1414 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 AL118508.1-201ENST00000613502 2345 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 AC018695.7-201ENST00000624587 2492 ntBASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX49Q9Y6V7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 CHCHD2P8-201ENST00000429873 447 ntBASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 TPSP2-201ENST00000561760 610 ntBASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX49Q9Y6V7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.08■□□□□ 0.96
DDX49Q9Y6V7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms