Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 AC113410.3-201ENST00000623366 203 ntBASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB1Q9Y5G3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 TMPOP1-202ENST00000424642 1267 ntBASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AL355075.4-201ENST00000554988 638 ntBASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AC008687.5-201ENST00000593746 558 ntBASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AC097493.4-201ENST00000641197 219 ntBASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB1Q9Y5G3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 AC005915.1-201ENST00000624912 2018 ntBASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB1Q9Y5G3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms