Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 FLJ13224-201ENST00000313737 1514 ntBASIC22.79■■□□□ 1.24
SPG7Q9UQ90 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 AC091812.2-201ENST00000619081 385 ntBASIC22.79■■□□□ 1.24
SPG7Q9UQ90 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG7Q9UQ90 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 AP000344.2-201ENST00000512987 629 ntBASIC22.78■■□□□ 1.24
SPG7Q9UQ90 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 AC027612.4-201ENST00000605371 583 ntBASIC22.78■■□□□ 1.24
SPG7Q9UQ90 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SPG7Q9UQ90 AL138781.2-201ENST00000617896 1843 ntBASIC22.78■■□□□ 1.24
SPG7Q9UQ90 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SPG7Q9UQ90 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 FAM185BP-201ENST00000443595 716 ntBASIC22.76■■□□□ 1.23
SPG7Q9UQ90 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SPG7Q9UQ90 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms