Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AL355312.1-201ENST00000407115 2176 ntBASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXD3Q9UJU5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 AC007967.3-201ENST00000434308 558 ntBASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 SLC25A1P1-201ENST00000528351 927 ntBASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXD3Q9UJU5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 LINC00896-202ENST00000609602 2128 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AC133963.1-201ENST00000504166 1679 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 COX5BP2-201ENST00000392354 334 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 OR7E14P-202ENST00000530490 1290 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AC021087.4-201ENST00000563761 564 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AC145285.3-201ENST00000564603 959 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 AC116407.3-201ENST00000623905 1129 ntBASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXD3Q9UJU5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXD3Q9UJU5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXD3Q9UJU5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms