Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC27.47■■□□□ 1.99
RIMBP3Q9UFD9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 BOLA2P3-201ENST00000404566 256 ntBASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 AC142381.1-201ENST00000426099 345 ntBASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC27.46■■□□□ 1.99
RIMBP3Q9UFD9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC27.45■■□□□ 1.99
RIMBP3Q9UFD9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 MIR3615-201ENST00000581999 87 ntBASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 AC243960.2-201ENST00000600996 747 ntBASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 AC106872.11-201ENST00000605838 421 ntBASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC27.45■■□□□ 1.98
RIMBP3Q9UFD9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 BRWD1P1-201ENST00000401091 371 ntBASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 AC055876.2-201ENST00000531834 546 ntBASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 AGER-214ENST00000538695 487 ntTSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RIMBP3Q9UFD9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 USP32P1-208ENST00000506594 1164 ntBASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RIMBP3Q9UFD9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 AL080243.2-201ENST00000418783 582 ntBASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.42■■□□□ 1.98
RIMBP3Q9UFD9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms