Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HACD3Q9P035 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HACD3Q9P035 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 AC007967.3-201ENST00000434308 558 ntBASIC17.78■□□□□ 0.44
HACD3Q9P035 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.78■□□□□ 0.44
HACD3Q9P035 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.78■□□□□ 0.44
HACD3Q9P035 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.78■□□□□ 0.44
HACD3Q9P035 AC012615.1-201ENST00000565797 1299 ntBASIC17.78■□□□□ 0.44
HACD3Q9P035 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.78■□□□□ 0.44
HACD3Q9P035 AP005901.3-202ENST00000581653 237 ntBASIC17.78■□□□□ 0.44
HACD3Q9P035 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.78■□□□□ 0.44
HACD3Q9P035 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HACD3Q9P035 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.78■□□□□ 0.44
HACD3Q9P035 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.78■□□□□ 0.44
HACD3Q9P035 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HACD3Q9P035 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
HACD3Q9P035 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 AC010460.3-201ENST00000511359 1579 ntBASIC17.78■□□□□ 0.44
HACD3Q9P035 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HACD3Q9P035 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HACD3Q9P035 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 AC133963.1-201ENST00000504166 1679 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.77■□□□□ 0.44
HACD3Q9P035 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 FAM220CP-201ENST00000395253 831 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 MINOS1P3-201ENST00000457048 203 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.77■□□□□ 0.44
HACD3Q9P035 AC091607.1-201ENST00000490318 1060 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 AC122714.2-201ENST00000502787 707 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 AC104819.1-201ENST00000504587 486 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
HACD3Q9P035 AC092119.3-201ENST00000612618 583 ntBASIC17.77■□□□□ 0.44
HACD3Q9P035 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HACD3Q9P035 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.77■□□□□ 0.44
HACD3Q9P035 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HACD3Q9P035 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HACD3Q9P035 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.77■□□□□ 0.43
HACD3Q9P035 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HACD3Q9P035 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.77■□□□□ 0.43
HACD3Q9P035 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HACD3Q9P035 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HACD3Q9P035 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.77■□□□□ 0.43
HACD3Q9P035 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HACD3Q9P035 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HACD3Q9P035 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.76■□□□□ 0.43
HACD3Q9P035 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.76■□□□□ 0.43
HACD3Q9P035 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.76■□□□□ 0.43
HACD3Q9P035 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HACD3Q9P035 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms