Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL1Q9NR64 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 LINC01126-201ENST00000623515 1646 ntBASIC16.56■□□□□ 0.24
KLHL1Q9NR64 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 AL160237.2-201ENST00000556165 472 ntBASIC16.56■□□□□ 0.24
KLHL1Q9NR64 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.56■□□□□ 0.24
KLHL1Q9NR64 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.56■□□□□ 0.24
KLHL1Q9NR64 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KLHL1Q9NR64 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 AC008764.6-201ENST00000595909 2069 ntBASIC16.55■□□□□ 0.24
KLHL1Q9NR64 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.55■□□□□ 0.24
KLHL1Q9NR64 AC106820.2-201ENST00000563775 3264 ntBASIC16.55■□□□□ 0.24
KLHL1Q9NR64 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AC079776.4-201ENST00000511039 504 ntBASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 BNIP3P18-201ENST00000593976 575 ntBASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AC104692.2-201ENST00000603054 253 ntBASIC16.54■□□□□ 0.24
KLHL1Q9NR64 AL591684.3-201ENST00000605187 298 ntBASIC16.54■□□□□ 0.24
KLHL1Q9NR64 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL1Q9NR64 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms