Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 AC005104.2-201ENST00000427818 678 ntBASIC16.18■□□□□ 0.18
TRIM2Q9C040 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 GUSBP12-201ENST00000513727 720 ntBASIC16.18■□□□□ 0.18
TRIM2Q9C040 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM2Q9C040 AC097374.2-201ENST00000618617 1306 ntBASIC16.18■□□□□ 0.18
TRIM2Q9C040 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM2Q9C040 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 SPDYE13P-201ENST00000445314 798 ntBASIC16.17■□□□□ 0.18
TRIM2Q9C040 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM2Q9C040 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM2Q9C040 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 CROCCP2-202ENST00000412962 2773 ntBASIC16.16■□□□□ 0.18
TRIM2Q9C040 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 AL645929.1-201ENST00000420084 975 ntBASIC16.16■□□□□ 0.18
TRIM2Q9C040 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM2Q9C040 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms