Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TM9SF2Q99805 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 DUSP5P1-201ENST00000441325 1139 ntBASIC16.33■□□□□ 0.2
TM9SF2Q99805 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 AL691432.3-201ENST00000621860 400 ntBASIC16.33■□□□□ 0.2
TM9SF2Q99805 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 AC009102.3-201ENST00000623118 1491 ntBASIC16.33■□□□□ 0.2
TM9SF2Q99805 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 OR6D1P-203ENST00000641209 4860 ntBASIC16.33■□□□□ 0.2
TM9SF2Q99805 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.33■□□□□ 0.2
TM9SF2Q99805 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.33■□□□□ 0.2
TM9SF2Q99805 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TM9SF2Q99805 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 DRAXINP1-201ENST00000437611 948 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 AP002383.4-201ENST00000442518 975 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 GUSBP12-201ENST00000513727 720 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 MIR3180-1-201ENST00000580374 94 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 MIR3180-3-201ENST00000584616 94 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF2Q99805 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 IGHV3-41-201ENST00000613121 348 ntBASIC16.32■□□□□ 0.2
TM9SF2Q99805 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF2Q99805 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF2Q99805 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF2Q99805 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms