Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SDHAP2-201ENST00000455183 2001 ntBASIC16.54■□□□□ 0.24
NR1H4Q96RI1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 TCAF2P1-201ENST00000291129 2421 ntBASIC16.54■□□□□ 0.24
NR1H4Q96RI1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NR1H4Q96RI1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.53■□□□□ 0.24
NR1H4Q96RI1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 AC100803.2-201ENST00000562459 1963 ntBASIC16.53■□□□□ 0.24
NR1H4Q96RI1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H4Q96RI1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 AC091874.3-201ENST00000512672 1195 ntBASIC16.52■□□□□ 0.24
NR1H4Q96RI1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H4Q96RI1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms