Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 ACA64.2-201ENST00000459014 129 ntBASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC23.13■■□□□ 1.29
COL22A1Q8NFW1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 AC005412.3-201ENST00000580309 715 ntBASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 AL096828.2-201ENST00000567259 1965 ntBASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 AC005332.7-201ENST00000614046 2005 ntBASIC23.12■■□□□ 1.29
COL22A1Q8NFW1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 MIR4453-201ENST00000584019 89 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AL138828.2-201ENST00000615812 383 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 WASH4P-201ENST00000564273 1246 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 AC017083.2-201ENST00000608069 979 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
COL22A1Q8NFW1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL22A1Q8NFW1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AC073592.3-201ENST00000625118 1834 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms