Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 AJ011932.1-201ENST00000621707 465 ntBASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 AC046185.3-201ENST00000623228 1824 ntBASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KLHDC9Q8NEP7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.19■□□□□ 0.66
KLHDC9Q8NEP7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SPDYE11-202ENST00000450699 704 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AC069335.1-201ENST00000489972 472 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 RNA5SP421-201ENST00000516864 134 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AC069262.1-201ENST00000539058 672 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AL512356.2-201ENST00000546955 174 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SPDYE9P-201ENST00000570642 692 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SPDYE10P-202ENST00000612005 668 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SPDYE8P-202ENST00000612377 668 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AL645728.2-201ENST00000641974 660 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 AP000974.1-201ENST00000623909 2387 ntBASIC19.18■□□□□ 0.66
KLHDC9Q8NEP7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KLHDC9Q8NEP7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHDC9Q8NEP7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.17■□□□□ 0.66
KLHDC9Q8NEP7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
KLHDC9Q8NEP7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KLHDC9Q8NEP7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms