Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AC005786.4-201ENST00000623369 682 ntBASIC17.7■□□□□ 0.42
PACS2Q86VP3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.7■□□□□ 0.42
PACS2Q86VP3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PACS2Q86VP3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 RN7SL832P-201ENST00000607781 1756 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 HEIH-201ENST00000623091 1652 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC004980.1-204ENST00000429707 299 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC116562.2-201ENST00000507042 360 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AL160286.2-201ENST00000567150 934 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PACS2Q86VP3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
PACS2Q86VP3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PACS2Q86VP3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 UNC93B2-201ENST00000285383 730 ntBASIC17.68■□□□□ 0.42
PACS2Q86VP3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CICP13-201ENST00000422015 2789 ntBASIC17.68■□□□□ 0.42
PACS2Q86VP3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 AC060834.1-201ENST00000443027 2032 ntBASIC17.68■□□□□ 0.42
PACS2Q86VP3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 AL355075.4-201ENST00000554988 638 ntBASIC17.68■□□□□ 0.42
PACS2Q86VP3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms