Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM1Q86UE6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 LINC02012-201ENST00000608206 1725 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SLC25A1P3-201ENST00000395415 828 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 AL158047.1-201ENST00000445918 881 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 EGLN1P1-201ENST00000531623 762 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 NEK4P2-201ENST00000580004 1012 ntBASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM1Q86UE6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 FER1L4-210ENST00000615531 5998 ntBASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 AL139327.4-201ENST00000612362 153 ntBASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 KRT89P-201ENST00000620027 1478 ntBASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM1Q86UE6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 DOC2GP-204ENST00000639052 2548 ntBASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 AL603756.1-201ENST00000606511 2163 ntBASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRTM1Q86UE6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms