Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.4■□□□□ 0.86
IRX3P78415 AC005829.1-201ENST00000570002 483 ntBASIC20.4■□□□□ 0.86
IRX3P78415 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IRX3P78415 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.4■□□□□ 0.86
IRX3P78415 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.4■□□□□ 0.86
IRX3P78415 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.4■□□□□ 0.86
IRX3P78415 AL596442.2-201ENST00000610240 980 ntBASIC20.4■□□□□ 0.86
IRX3P78415 AC132938.5-201ENST00000624980 1813 ntBASIC20.4■□□□□ 0.86
IRX3P78415 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.4■□□□□ 0.86
IRX3P78415 AC099398.1-201ENST00000567919 2776 ntBASIC20.4■□□□□ 0.86
IRX3P78415 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IRX3P78415 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IRX3P78415 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.39■□□□□ 0.86
IRX3P78415 AC148477.5-201ENST00000625164 1645 ntBASIC20.39■□□□□ 0.86
IRX3P78415 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.39■□□□□ 0.85
IRX3P78415 AL049757.1-201ENST00000616842 1596 ntBASIC20.39■□□□□ 0.85
IRX3P78415 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
IRX3P78415 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.39■□□□□ 0.85
IRX3P78415 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.39■□□□□ 0.85
IRX3P78415 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
IRX3P78415 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.39■□□□□ 0.85
IRX3P78415 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.39■□□□□ 0.85
IRX3P78415 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.39■□□□□ 0.85
IRX3P78415 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.39■□□□□ 0.85
IRX3P78415 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IRX3P78415 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.38■□□□□ 0.85
IRX3P78415 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.38■□□□□ 0.85
IRX3P78415 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.38■□□□□ 0.85
IRX3P78415 SIGLEC30P-201ENST00000455569 941 ntBASIC20.38■□□□□ 0.85
IRX3P78415 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.38■□□□□ 0.85
IRX3P78415 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.38■□□□□ 0.85
IRX3P78415 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
IRX3P78415 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.38■□□□□ 0.85
IRX3P78415 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX3P78415 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 AC090340.1-201ENST00000620778 4980 ntBASIC20.38■□□□□ 0.85
IRX3P78415 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX3P78415 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IRX3P78415 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
IRX3P78415 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
IRX3P78415 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.37■□□□□ 0.85
IRX3P78415 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
IRX3P78415 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 AC003669.1-201ENST00000334569 611 ntBASIC20.37■□□□□ 0.85
IRX3P78415 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.37■□□□□ 0.85
IRX3P78415 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 VN2R19P-201ENST00000442399 1052 ntBASIC20.37■□□□□ 0.85
IRX3P78415 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.37■□□□□ 0.85
IRX3P78415 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
IRX3P78415 AL513477.1-201ENST00000602865 2407 ntBASIC20.37■□□□□ 0.85
IRX3P78415 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX3P78415 PCDHB18P-201ENST00000524813 2368 ntBASIC20.37■□□□□ 0.85
IRX3P78415 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX3P78415 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms