Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RAB38P57729 AC009336.1-201ENST00000608941 1553 ntBASIC16.5■□□□□ 0.23
RAB38P57729 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB38P57729 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB38P57729 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAB38P57729 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 SPDYE21P-201ENST00000413323 827 ntBASIC16.49■□□□□ 0.23
RAB38P57729 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 EMBP1-201ENST00000458200 901 ntBASIC16.49■□□□□ 0.23
RAB38P57729 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 AF238378.1-201ENST00000526806 358 ntBASIC16.49■□□□□ 0.23
RAB38P57729 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB38P57729 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB38P57729 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB38P57729 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 RN7SL510P-201ENST00000581311 263 ntBASIC16.49■□□□□ 0.23
RAB38P57729 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB38P57729 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 SIGLEC16-201ENST00000599858 1437 ntBASIC16.49■□□□□ 0.23
RAB38P57729 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 AC073592.4-201ENST00000623827 446 ntBASIC16.49■□□□□ 0.23
RAB38P57729 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.49■□□□□ 0.23
RAB38P57729 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB38P57729 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB38P57729 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB38P57729 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB38P57729 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB38P57729 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RAB38P57729 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 AC046185.3-201ENST00000623228 1824 ntBASIC16.48■□□□□ 0.23
RAB38P57729 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB38P57729 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAB38P57729 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RAB38P57729 FGFR3P6-201ENST00000457012 610 ntBASIC16.48■□□□□ 0.23
RAB38P57729 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 AL139288.1-201ENST00000623748 933 ntBASIC16.48■□□□□ 0.23
RAB38P57729 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB38P57729 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
RAB38P57729 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB38P57729 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms